Search Results - subject:"binding site"

Supervised Detection of Conserved Motifs in DNA Sequences with Cosmo

Bembom, Oliver; Keles, Sunduz; Laan, Mark van der - In: Statistical Applications in Genetics and Molecular Biology 6 (2009) 1, pp. 8-8

A number of computational methods have been proposed for identifying transcription factor binding sites from a set of unaligned sequences that are thought to share the motif in question. We here introduce an algorithm, called cosmo, that allows this search to be supervised by specifying a set of...

Persistent link: https://www.econbiz.de/10005046573

Supervised Detection of Conserved Motifs in DNA Sequences with Cosmo

Bembom, Oliver; Keles, Sunduz; Laan, Mark van der - In: Statistical Applications in Genetics and Molecular Biology 6 (2007) 1, pp. 8-8

Persistent link: https://www.econbiz.de/10005752543

On the Power of Profiles for Transcription Factor Binding Site Detection

Rahmann, Sven; Müller, Tobias; Vingron, Martin - In: Statistical Applications in Genetics and Molecular Biology 2 (2007) 1, pp. 7-7

Transcription factor binding site (TFBS) detection plays an important role in computational biology, with applications …

Persistent link: https://www.econbiz.de/10005459160

Multiple Testing Methods For ChIP-Chip High Density Oligonucleotide Array Data

Keles, Sunduz; Laan, Mark van der; Dudoit, Sandrine; … - Berkeley Electronic Press - 2004

these potential target sequences contain the p53 consensus binding site or very close matches to it. Moreover, these target …

Persistent link: https://www.econbiz.de/10005459074