EconBiz - Find Economic Literature
    • Logout
    • Change account settings
  • A-Z
  • Beta
  • About EconBiz
  • News
  • Thesaurus (STW)
  • Academic Skills
  • Help
  •  My account 
    • Logout
    • Change account settings
  • Login
EconBiz - Find Economic Literature
Publications Events
Search options
Advanced Search history
My EconBiz
Favorites Loans Reservations Fines
    You are here:
  • Home
  • Search: subject:"codon"
Narrow search

Narrow search

Year of publication
Subject
All
Codon usage 4 Bootstrap 3 HIV-1 3 codon 3 generalized family wise error rate 3 multiple testing 3 prediction 3 tail probability of the proportion of false positives 3 type I error 3 variable selection 3 Entropy 2 Genome 2 Microarrays 2 codon bias 2 life history 2 Bacterial genomes 1 Cluster 1 Codon Optimization 1 Codon distribution 1 Correlation 1 Correlations 1 Detrended distance distribution 1 GC content 1 Gene organisation 1 Genomic sequences 1 In silico 1 Information 1 Integer Linear Programming 1 Mathematical programming 1 Mathematische Optimierung 1 Mean field 1 Motif Engineering 1 Nearest neighbor spacing distribution 1 Protein Design 1 Ribosome network 1 Spectral statistics 1 Theorie 1 Theory 1 Transcription 1 Translation 1
more ... less ...
Online availability
All
Undetermined 9 Free 1
Type of publication
All
Article 9 Book / Working Paper 3
Type of publication (narrower categories)
All
Article in journal 1 Aufsatz in Zeitschrift 1
Language
All
Undetermined 11 English 1
Author
All
Birkner, Merrill 3 Laan, Mark van der 3 Sinisi, Sandra 3 Frappat, L. 2 Sciarrino, A. 2 Wagner, Andreas 2 Arbib, Claudio 1 Danchin, Antoine 1 Delport W. 1 Geiger, O. 1 Gorban, Alexander 1 Higareda, M.F. 1 Mendoza, L. 1 Muse S.V. 1 Méndez-Sánchez, R.A. 1 Pond S.K. 1 Popova, Tatyana 1 Pınar, Mustafa Ç. 1 Rossi, Fabrizio 1 Scheffler K. 1 Sorba, P. 1 Tessitore, Alessandra 1 Zinovyev, Andrey 1
more ... less ...
Institution
All
Santa Fe Institute 2 Berkeley Electronic Press 1
Published in...
All
Physica A: Statistical Mechanics and its Applications 5 Statistical Applications in Genetics and Molecular Biology 2 Working Papers / Santa Fe Institute 2 Computers & operations research : and their applications to problems of world concern ; an international journal 1 U.C. Berkeley Division of Biostatistics Working Paper Series 1
Source
All
RePEc 10 BASE 1 ECONIS (ZBW) 1
Showing 1 - 10 of 12
Cover Image
Codon optimization by 0-1 linear programming
Arbib, Claudio; Pınar, Mustafa Ç.; Rossi, Fabrizio; … - In: Computers & operations research : and their … 119 (2020), pp. 1-11
Persistent link: https://www.econbiz.de/10012236820
Saved in:
Cover Image
Correcting the bias of empirical frequency parameter estimators in codon models
Pond S.K.; Delport W.; Muse S.V.; Scheffler K. - 2010
Markov models of codon substitution are powerful inferential tools for studying biological processes such as natural …
Persistent link: https://www.econbiz.de/10009480473
Saved in:
Cover Image
Evidence of codon usage in the nearest neighbor spacing distribution of bases in bacterial genomes
Higareda, M.F.; Geiger, O.; Mendoza, L.; … - In: Physica A: Statistical Mechanics and its Applications 391 (2012) 4, pp. 1255-1269
difference in the codon usage. …
Persistent link: https://www.econbiz.de/10011064075
Saved in:
Cover Image
Multiple Testing and Data Adaptive Regression: An Application to HIV-1 Sequence Data.
Birkner, Merrill; Sinisi, Sandra; Laan, Mark van der - In: Statistical Applications in Genetics and Molecular Biology 4 (2009) 1, pp. 8-8
Analysis of viral strand sequence data and viral replication capacity could potentially lead to biological insights regarding the replication ability of HIV-1. Determining specific target codons on the viral strand will facilitate the manufacturing of target-specific antiretrovirals. Various...
Persistent link: https://www.econbiz.de/10005046606
Saved in:
Cover Image
Multiple Testing and Data Adaptive Regression: An Application to HIV-1 Sequence Data.
Birkner, Merrill; Sinisi, Sandra; Laan, Mark van der - In: Statistical Applications in Genetics and Molecular Biology 4 (2007) 1, pp. 8-8
Analysis of viral strand sequence data and viral replication capacity could potentially lead to biological insights regarding the replication ability of HIV-1. Determining specific target codons on the viral strand will facilitate the manufacturing of target-specific antiretrovirals. Various...
Persistent link: https://www.econbiz.de/10005246474
Saved in:
Cover Image
Conspiracy in bacterial genomes
Frappat, L.; Sciarrino, A. - In: Physica A: Statistical Mechanics and its Applications 369 (2006) 2, pp. 699-713
The rank ordered distribution of the codon usage frequencies for 109 eubacteria and 14 archaea is best fitted by a … partial entropies computed over subsets of the codons show peculiar different behavior. Moreover, the sum of the codon usage …
Persistent link: https://www.econbiz.de/10010871631
Saved in:
Cover Image
Codon usage trajectories and 7-cluster structure of 143 complete bacterial genomic sequences
Gorban, Alexander; Popova, Tatyana; Zinovyev, Andrey - In: Physica A: Statistical Mechanics and its Applications 353 (2005) C, pp. 365-387
Three results are presented. First, we prove the existence of a universal 7-cluster structure in all 143 completely sequenced bacterial genomes available in Genbank in August 2004, and explained its properties. The 7-cluster structure is responsible for the main part of sequence heterogeneity in...
Persistent link: https://www.econbiz.de/10011063364
Saved in:
Cover Image
Correlation matrix for quartet codon usage
Frappat, L.; Sciarrino, A.; Sorba, P. - In: Physica A: Statistical Mechanics and its Applications 351 (2005) 2, pp. 461-476
It has been argued that the sum of usage probabilities for codons, belonging to quartets, that have as third nucleotide C or A, is independent of the biological species for vertebrates. The comparison between the theoretical correlation matrix derived from these sum rules and the experimentally...
Persistent link: https://www.econbiz.de/10010590671
Saved in:
Cover Image
Multiple Testing and Data Adaptive Regression: An Application to HIV-1 Sequence Data
Birkner, Merrill; Sinisi, Sandra; Laan, Mark van der - Berkeley Electronic Press - 2004
Analysis of viral strand sequence data and viral replication capacity could potentially lead to biological insights regarding the replication ability of HIV-1. Determining specific target codons on the viral strand will facilitate the manufacturing of target specific antiretrovirals. Various...
Persistent link: https://www.econbiz.de/10005246353
Saved in:
Cover Image
Decoupled Evolution of Coding Region and mRNA Expression Patterns After Gene Duplication : Implications for the Neutralist-Selectionist Debate
Wagner, Andreas - Santa Fe Institute - 2000
The neutralist perspective on molecular evolution maintains that the vast majority of mutations effecting gene function are neutral or deleterious. Following a gene duplication where both genes are retained, it predicts that original and duplicate genes diverge at clock-like rates. This...
Persistent link: https://www.econbiz.de/10005790868
Saved in:
  • 1
  • 2
  • Next
  • Last
A service of the
zbw
  • Sitemap
  • Plain language
  • Accessibility
  • Contact us
  • Imprint
  • Privacy

Loading...