Sequence alignment using simulated annealing

We apply simulated annealing to amino acid sequence alignment, a fundamental problem in bioinformatics, particularly relevant to evolution. Our goal was obtaining results comparable to those reached through dynamic programming algorithms, like the Needleman–Wunsch algorithm, as well as making a connection between physics and bioinformatics through a representative example.

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Year of publication:	2010
Authors:	Sarıyer, Ozan S. ; Güven, Can
Published in:	Physica A: Statistical Mechanics and its Applications. - Elsevier, ISSN 0378-4371. - Vol. 389.2010, 15, p. 3007-3012
Publisher:	Elsevier
Subject:	Bioinformatics \| Simulated annealing

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Type of publication:	Article
Source:	RePEc - Research Papers in Economics

Persistent link: https://www.econbiz.de/10011060765