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Lattice polymers 7 Polymer collapse 3 Semi-flexible polymers 3 Collapse transition 2 Self-avoiding walk 2 Stiff polymers 2 Theta point 2 Attracting segments model 1 Hydrogen bonded polymers 1 Improved sampling 1 Interacting Self-Avoiding Walk 1 Interacting self-avoiding walk 1 Interacting self-avoiding walks 1 Interacting trails 1 Kinetic growth 1 Proteins 1 SAW 1 Secondary structures 1 Self-avoiding trails 1 Self-avoiding walks 1 Self-interacting trails 1 Surface attached 1 Theta-point 1 Trails 1
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Owczarek, A.L. 5 Prellberg, T. 5 Krawczyk, J. 3 Bedini, A. 1 Kasuya, Atsuo 1 Kawazoe, Yoshiyuki 1 Kozyrev, S.V. 1 Shida, Kazuhito 1 Volovich, I.V. 1
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Physica A: Statistical Mechanics and its Applications 7
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Showing 1 - 7 of 7
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A semi-flexible attracting-segment model of three-dimensional polymer collapse
Krawczyk, J.; Owczarek, A.L.; Prellberg, T. - In: Physica A: Statistical Mechanics and its Applications 431 (2015) C, pp. 74-83
Recently it has been shown that a two-dimensional model of self-attracting polymers based on attracting segments with the addition of stiffness displays three phases: a swollen phase, a globular, liquid-like phase, and an anisotropic crystal-like phase. Here, we consider the attracting segment...
Persistent link: https://www.econbiz.de/10011264584
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Quinary lattice model of secondary structures of polymers
Kozyrev, S.V.; Volovich, I.V. - In: Physica A: Statistical Mechanics and its Applications 393 (2014) C, pp. 86-95
In the standard approach to lattice proteins models based on nearest neighbor interaction are used. In this kind of model it is difficult to explain the existence of secondary structures—special preferred conformations of protein chains.
Persistent link: https://www.econbiz.de/10011063881
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Semi-flexible interacting self-avoiding trails on the square lattice
Bedini, A.; Owczarek, A.L.; Prellberg, T. - In: Physica A: Statistical Mechanics and its Applications 392 (2013) 7, pp. 1602-1610
Self-avoiding walks self-interacting via nearest neighbours (ISAW) and self-avoiding trails interacting via multiply-visited sites (ISAT) are two models of the polymer collapse transition of a polymer in a dilute solution. On the square lattice it has been established numerically that the...
Persistent link: https://www.econbiz.de/10010874368
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A semi-flexible attracting segment model of two-dimensional polymer collapse
Krawczyk, J.; Owczarek, A.L.; Prellberg, T. - In: Physica A: Statistical Mechanics and its Applications 389 (2010) 8, pp. 1619-1624
Recently it has been shown that a two-dimensional model of self-attracting polymers based on attracting segments displays two phase transitions, a θ-like collapse between swollen polymers and a globular state and another between the globular state and a polymer crystal. On the other hand, the...
Persistent link: https://www.econbiz.de/10011062071
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Semi-flexible hydrogen-bonded and non-hydrogen bonded lattice polymers
Krawczyk, J.; Owczarek, A.L.; Prellberg, T. - In: Physica A: Statistical Mechanics and its Applications 388 (2009) 2, pp. 104-112
We investigate the addition of stiffness to the lattice model of hydrogen-bonded polymers in two and three dimensions. We find that, in contrast to polymers that interact via a homogeneous short-range interaction, the collapse transition is unchanged by any amount of stiffness: this supports the...
Persistent link: https://www.econbiz.de/10011059000
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Entropic and conformational study of isolated double-tethered chains by three-dimensional lattice simulations
Shida, Kazuhito; Kasuya, Atsuo; Kawazoe, Yoshiyuki - In: Physica A: Statistical Mechanics and its Applications 382 (2007) 2, pp. 405-414
Double-tethered polymers are a kind of linear polymer with a peculiar topological constraint; that is, both of its end-points are attached to a plane which the polymer segments cannot penetrate. The effects of the constraint on the polymer's configurational and entropic properties were...
Persistent link: https://www.econbiz.de/10010874531
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Existence of four-dimensional polymer collapse I. Kinetic growth trails
Owczarek, A.L.; Prellberg, T. - In: Physica A: Statistical Mechanics and its Applications 260 (1998) 1, pp. 20-30
We present the results of simulations of kinetic growth trails (KGT) (bond-avoiding walks) in four dimensions. We use a mapping from a kinetic growth model to a static model of self-interacting trails (ISAT) at a particular temperature to argue that this temperature is precisely the collapse...
Persistent link: https://www.econbiz.de/10010599530
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