to the traditional Bayesian or random effect gamma or log-normal models in some situations. A multiple testing procedure …

Consider the standard multiple testing problem where many hypotheses are to be tested, each hypothesis is associated … a user-supplied threshold. Among such multiple testing procedures, we derive the most powerful method, meaning the test … as a benchmark multiple testing procedure. We show that in certain circumstances the use of estimated optimal cutoffs via …

Multiple testing procedures are commonly used in gene expression studies for the detection of differential expression … testing procedures, and the attendant danger of false positives in multiple testing, the False Discovery Rate (FDR …

The present article proposes general single-step multiple testing procedures for controlling Type I error rates defined … among the rejected hypotheses (van der Laan et al., 2004a). The proposed bootstrap multiple testing procedures are evaluated …. The special cases of t- and F-statistics are discussed in detail. The companion articles focus on step-down multiple …

used to handle the multiple testing issue. The methods above are applied to a data set with 4 doses (3 arrays per dose) and …

applications. In this article we propose a new re-sampling based multiple testing procedure asymptotically controlling the … establish the finite sample rational behind our proposal, and prove that this new multiple testing procedure asymptotically … previously proposed augmentation multiple testing procedure (van der Laan, Dudoit, & Pollard (2004b)) and competing procedures …

association studies, phase is generally unobservable. Preservation of type-1 error in a setting with multiple testing presents a … resampling method to adjust for multiple testing. Through simulations we demonstrate preservation of the family-wise error rate …

transcriptase codons. The first application is recently developed multiple testing procedures to find codons which have significant … univariate associations with the replication capacity of the virus. A single-step multiple testing procedure (Pollard and van der … application of augmentation multiple testing procedures to control the generalized family wise error (gFWER) or the tail …

-statistics. Re-sampling based multiple testing (Westfall and Young, 1993) involves sampling from a joint null distribution of the … illustrated that the resulting new re-sampling based multiple testing methods provide more accurate control of the wished Type …

This article shows that any single-step or stepwise multiple testing procedure (asymptotically) controlling the family …. Applying the augmentation methods to step-down multiple testing procedures that control the FWER asymptotically exactly at …