Search Results - subject:"Protein structure"

A Peaceman-Rachford splitting method for the protein side-chain positioning problem

Burkowski, Forbes; Im, Haesol; Wolkowicz, Henry - In: INFORMS journal on computing : JOC ; charting new … 37 (2025) 4, pp. 962-976

Persistent link: https://www.econbiz.de/10015453414

Forecasting the growth of structures from NMR and X-raycrystallography experiments released per year

Al Nasr, Kamal; Al-Haija, Qasem Abu - In: Journal of information & knowledge management : JIKM 19 (2020) 1, pp. 2040004-1-2040004-12

Persistent link: https://www.econbiz.de/10012292220

Barvinok's naive algorithm in Distance Geometry

Liberti, Leo; Vu, Ky Khac - In: Operations research letters 46 (2018) 5, pp. 476-481

Persistent link: https://www.econbiz.de/10011936677

Domgen-graph based mathod for protein domain delineation

Milostan, Maciej; Lukasiak, Piotr - In: RAIRO 50 (2016) 2, pp. 363-374

Persistent link: https://www.econbiz.de/10011672917

Constraint-handling through multi-objective optimization : the hydrophobic-polar model for protein structure prediction

Garza-Fabre, Mario; Rodriguez-Tello, Eduardo; … - In: Computers & operations research : and their … 53 (2015), pp. 128-153

Persistent link: https://www.econbiz.de/10010493490

Multi-objectivization, fitness landscape transformation and search performance : a case of study on the hp model for protein structure prediction

Garza-Fabre, Mario; Toscano-Pulido, Gregorio; … - In: European journal of operational research : EJOR 243 (2015) 2, pp. 405-422

Persistent link: https://www.econbiz.de/10010510090

Multi-objectivization, fitness landscape transformation and search performance: A case of study on the hp model for protein structure prediction

Garza-Fabre, Mario; Toscano-Pulido, Gregorio; … - In: European Journal of Operational Research 243 (2015) 2, pp. 405-422

applied with success to the HP model, a simplified yet challenging representation of the protein structure prediction problem …

Persistent link: https://www.econbiz.de/10011209407

7.89 Topics in Computational and Systems Biology, Fall 2007

Burge, Christopher - 2007

This is a seminar based on research literature. Papers covered are selected to illustrate important problems and approaches in the field of computational and systems biology, and provide students a framework from which to evaluate new developments. The MIT Initiative in Computational and Systems...

Persistent link: https://www.econbiz.de/10009432650

Protein structure optimization by side-chain positioning via beta-complex

Ryu, Joonghyun; Kim, Deok-Soo - In: Journal of Global Optimization 57 (2013) 1, pp. 217-250

molecular structure is fundamental. One of the core problems in the optimization of protein structure is the optimization of …

Persistent link: https://www.econbiz.de/10010896356

Functional Cluster Analysis via Orthonormalized Gaussian Basis Expansions and Its Application

Kayano, Mitsunori; Dozono, Koji; Konishi, Sadanori - In: Journal of Classification 27 (2010) 2, pp. 211-230

Persistent link: https://www.econbiz.de/10008673992

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