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  • Search: subject:"microarray"
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Year of publication
Subject
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microarray 23 Microarray 16 gene expression 12 Gene expression 7 multiple testing 7 microarray data 6 Microarray data 5 empirical Bayes 5 false discovery rate 5 Clustering 4 Empirical Bayes 4 classification 4 microarray analysis 4 Bioinformatics 3 Coalitional game 3 DNA Microarray 3 MCMC computation 3 Microarray analysis 3 Microarray data analysis 3 Power index 3 Shapley value 3 cross-validation 3 density estimation 3 differential expression 3 mixture model 3 multiple comparisons 3 survival analysis 3 Cancer 2 Computational biology 2 DNA microarray 2 Estimation theory 2 False discovery rate 2 Feature Selection 2 Gene microarray 2 HDLSS 2 Kernel estimator 2 Markov chain Monte Carlo 2 Microarray gene expression 2 Mixture distributions 2 Mixture modeling 2
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Online availability
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Undetermined 88 Free 7
Type of publication
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Article 85 Book / Working Paper 14
Type of publication (narrower categories)
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Arbeitspapier 2 Article in journal 2 Aufsatz in Zeitschrift 2 Graue Literatur 2 Non-commercial literature 2 Working Paper 2
Language
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Undetermined 87 English 12
Author
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Klebanov, Lev 3 Laan, Mark van der 3 Moretti, Stefano 3 Yakovlev, Andrei 3 Anders Sjögren 2 Bansal, Naveen K. 2 Beyene, Joseph 2 Bickel, David 2 Bonney, George E. 2 Casella, George 2 Daly, Don 2 Dudoit, Sandrine 2 Ferreira, José 2 Gannoun, Ali 2 Joo, Yongsung 2 Keles, Sunduz 2 Kristiansson, Erik 2 Mansmann, Ulrich 2 Nerman, Olle 2 Rudemo, Mats 2 Saracco, Jérôme 2 Urfer, Wolfgang 2 White, Amanda 2 Zwinderman, Aeilko 2 Akteke-Öztürk, B. 1 Alfò, Marco 1 Alparslan-Gök, S. 1 Anderson, Kevin 1 Aoshima, Makoto 1 BIMONTE, Giovanna 1 Barlogie, Bart 1 Bignami, Margherita 1 Bir-Jmel, Ahmed 1 Bisoi, R. 1 Bittel, Douglas 1 Blasi, Francesco Simone 1 Blasi, Monica Francesca 1 Bochkina, Natalia 1 Boeke, Jef 1 Bonassi, Stefano 1
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Institution
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Berkeley Electronic Press 5 Departamento de Estadistica, Universidad Carlos III de Madrid 2 Centro di Economia del Lavoro e di Politica Economica (CELPE), Università degli Studi di Salerno 1 Santa Fe Institute 1 Université Paris-Dauphine 1 Université Paris-Dauphine (Paris IX) 1 Zakład Ekonometrii Stosowanej, Szkoła Główna Handlowa w Warszawie 1
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Published in...
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Statistical Applications in Genetics and Molecular Biology 40 Computational Statistics & Data Analysis 5 International Journal of Biostatistics 4 Journal of Multivariate Analysis 4 Physica A: Statistical Mechanics and its Applications 4 Computational Statistics 3 U.C. Berkeley Division of Biostatistics Working Paper Series 3 Journal of Applied Statistics 2 New Mathematics and Natural Computation (NMNC) 2 Statistics & Probability Letters 2 Statistics and Econometrics Working Papers 2 TEST: An Official Journal of the Spanish Society of Statistics and Operations Research 2 TOP: An Official Journal of the Spanish Society of Statistics and Operations Research 2 Technical report / Sonderforschungsbereich 475 Komplexitätsreduktion in Multivariaten Datenstrukturen, Universität Dortmund 2 Advances in Data Analysis and Classification 1 Annals of the Institute of Statistical Mathematics 1 CELPE Discussion Papers 1 Computers & operations research : and their applications to problems of world concern ; an international journal 1 Economics Papers from University Paris Dauphine 1 International Journal of Applied Evolutionary Computation (IJAEC) 1 International Journal of Game Theory 1 International Journal of Operations Research and Information Systems (IJORIS) 1 International Journal of Rough Sets and Data Analysis (IJRSDA) 1 International Journal of Service Science, Management, Engineering, and Technology (IJSSMET) 1 International Journal of Software Science and Computational Intelligence (IJSSCI) 1 Journal of Classification 1 Open Access publications from Université Paris-Dauphine 1 Psychometrika 1 RAIRO / Operations research 1 Romanian Statistical Review 1 Statistical Papers / Springer 1 Statistics & Decisions 1 The University of Michigan Department of Biostatistics Working Paper Series 1 UW Biostatistics Working Paper Series 1 Working Papers / Santa Fe Institute 1 Working Papers / Zakład Ekonometrii Stosowanej, Szkoła Główna Handlowa w Warszawie 1
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Source
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RePEc 89 Other ZBW resources 6 ECONIS (ZBW) 4
Showing 71 - 80 of 99
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Inference on the Limiting False Discovery Rate and the P-value Threshold Parameter Assuming Weak Dependence between Gene Expression Levels within Subject
Heller, Glenn; Qin, Jing - In: Statistical Applications in Genetics and Molecular Biology 6 (2007) 1, pp. 14-14
An objective of microarray data analysis is to identify gene expressions that are associated with a disease related …
Persistent link: https://www.econbiz.de/10005585087
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Calculating the Statistical Significance of Changes in Pathway Activity From Gene Expression Data
Jörg Rahnenführer; Domingues, Francisco; … - In: Statistical Applications in Genetics and Molecular Biology 3 (2007) 1, pp. 16-16
findings from microarray experiments.Recently introduced methods test if members of predefined gene sets are enriched in a list … of top-ranked genes in a microarray study. We improve this approach by defining scores that depend on all members of the …
Persistent link: https://www.econbiz.de/10005585090
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Fully Bayesian Mixture Model for Differential Gene Expression: Simulations and Model Checks
Lewin, Alex; Bochkina, Natalia; Richardson, Sylvia - In: Statistical Applications in Genetics and Molecular Biology 6 (2007) 1, pp. 36-36
We present a Bayesian hierarchical model for detecting differentially expressed genes using a mixture prior on the parameters representing differential effects. We formulate an easily interpretable 3-component mixture to classify genes as over-expressed, under-expressed and non-differentially...
Persistent link: https://www.econbiz.de/10005585098
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On the Operational Characteristics of the Benjamini and Hochberg False Discovery Rate Procedure
Green, Gerwyn; Diggle, Peter - In: Statistical Applications in Genetics and Molecular Biology 6 (2007) 1, pp. 27-27
Multiple testing procedures are commonly used in gene expression studies for the detection of differential expression, where typically thousands of genes are measured over at least two experimental conditions. Given the need for powerful testing procedures, and the attendant danger of false...
Persistent link: https://www.econbiz.de/10005585100
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Treating Expression Levels of Different Genes as a Sample in Microarray Data Analysis: Is it Worth a Risk?
Klebanov, Lev; Yakovlev, Andrei - In: Statistical Applications in Genetics and Molecular Biology 5 (2007) 1, pp. 9-9
One of the prevailing ideas in the literature on microarray data analysis is to pool the expression measures across … dependence represents a very serious pitfall in microarray data analysis. …
Persistent link: https://www.econbiz.de/10005585102
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The class of microarray games and the relevance index for genes
Moretti, Stefano; Patrone, Fioravante; Bonassi, Stefano - In: TOP: An Official Journal of the Spanish Society of … 15 (2007) 2, pp. 256-280
Persistent link: https://www.econbiz.de/10005598376
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Statistical Significance Threshold Criteria For Analysis of Microarray Gene Expression Data
Cheng, Cheng; Pounds, Stanley; Boyett, James; Pei, Deqing; … - In: Statistical Applications in Genetics and Molecular Biology 3 (2007) 1, pp. 36-36
The methodological advancement in microarray data analysis on the basis of false discovery rate (FDR) control, such as …
Persistent link: https://www.econbiz.de/10005752555
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Normalization of Dye Bias in Microarray Data Using the Mixture of Splines Model
Joo, Yongsung; Casella, George; Booth, James; Lee, Keunbaik - In: Statistical Applications in Genetics and Molecular Biology 6 (2007) 1, pp. 2-2
This paper discusses characteristics of dye biases in microarray data that the conventional normalization methods do …
Persistent link: https://www.econbiz.de/10005752556
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Correlation Between Gene Expression Levels and Limitations of the Empirical Bayes Methodology for Finding Differentially Expressed Genes
Qiu, Xing; Klebanov, Lev; Yakovlev, Andrei - In: Statistical Applications in Genetics and Molecular Biology 4 (2007) 1, pp. 34-34
Stochastic dependence between gene expression levels in microarray data is of critical importance for the methods of …
Persistent link: https://www.econbiz.de/10005752557
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Evaluation of Multiple Models to Distinguish Closely Related Forms of Disease Using DNA Microarray Data: an Application to Multiple Myeloma
Hardin, Johanna; Waddell, Michael; Page, C. David; … - In: Statistical Applications in Genetics and Molecular Biology 3 (2007) 1, pp. 10-10
themselves in altered gene expression patterns in the clonally related cancer cells. Microarray technology allows for qualitative … expression of 12,000 genes derived from a high density oligonucleotide microarray analysis of highly purified plasma cells from …
Persistent link: https://www.econbiz.de/10005752563
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